Installation

From PyPI

You can install mepylome directly from PyPI using pip:

pip install mepylome

From Source

If you want the latest version, you can download mepylome directly from the source:

git clone https://github.com/brj0/mepylome.git && cd mepylome && pip install .

Uninstallation

To uninstall Mepylome:

  1. Run:

    pip uninstall mepylome
    
  2. Delete the following directories:

    • ~/.cache/mepylome (Contains cached files)

    • ~/mepylome (Contains tutorial/example files)

Platform Compatibility

This package is written for Linux and has been tested under Ubuntu.

Warning

Windows users may encounter issues with the pyranges package, which affects CNV calculation, making it not possible to perform CNV calculations on Windows directly. However, apart from CNV calculations, other functionalities of the package should work on Windows.

To overcome this limitation, Windows users are advised to use Windows Subsystem for Linux (WSL).